Analysis of the heavy metals and Escherichia coli contamination of liquid organic fertilizers in the local market, Sri Lanka

Authors

  • Dasanayaka Lekamge Isuri Yasara
  • Wanigasekarage Isuru Dananjana
  • Bhagya Wijeratne

DOI:

https://doi.org/10.34117/bjdv10n5-017

Keywords:

liquid organic fertilizers, open vessel acid digestion, flame atomic absorption spectrometry, polymerase chain reaction, heavy metals, Escherichia coli

Abstract

Commercially available liquid organic fertilizers have gained popularity in agriculture due to their convenience and perceived environmental benefits. However, these fertilizers are susceptible to various contaminations, including heavy metals such as lead (Pb) and cadmium (Cd), as well as bacterial contaminants like Escherichia coli (E. coli). Monitoring these contaminants helps to identify potential health risks to consumers, prevent soil and water pollution, and maintain the quality of agricultural products. Therefore, this study involved a comprehensive analysis of Pb and Cd heavy metals and E. coli bacterial contaminants in two widely used liquid organic fertilizers in the local market. The samples were digested using an open-vessel acid digestion followed by the flame atomic absorption spectroscopic (FAAS) analysis. The limit of detection (LOD), limit of quantification (LOQ), matrix effect, and spike recovery were determined. The Pb concentration of one fertilizer was 3.45 (± 0.07) mg/kg with 92% recovery whereas the other was 2.87 (± 0.08) mg/kg with 91% recovery. In contrast, the Cd concentration was 0.09 (± 0.01) mg/kg and 0.11 (± 0.01) mg/kg with percentage recoveries of 93% and 90% for two fertilizers respectively. The Pb content exceeded the maximum permissible limit of 1.0 mg/kg set by the Sri Lanka Standard (SLS 1702:2121), while Cd levels remained within the limit of 0.5 mg/kg. Polymerase chain reaction (PCR) coupled with gel electrophoresis confirmed the presence of the pathogenic O157:H7 E. coli strain in both fertilizers. Thus, the results of this study confirmed the lead (Pb) and Escherichia coli contamination in liquid organic fertilizers in the local market of Sri Lanka.

References

Abdus-Salam N, Adekola FA. 2010. The influence of pH and adsorbent concentration on adsorption of lead and zinc on a natural goethite. African Journal of Science and Technology. 6(2):55-66. https://doi.org/10.4314/ajst.v6i2.55175

Adegoke AA, Awolusi OO, Stenström TA. 2016. Organic Fertilizers: Public Health Intricacies. In Larramendy, ML, Soloneski S, editors. Organic Fertilizers - From Basic Concepts to Applied Outcomes. 1st ed. United Kingdom: IntechOpen; p 343-372.

Ahuja I, Dauksas E, Remme JF, Richardsen R, Løes AK. 2020. Fish and fish waste-based fertilizers in organic farming – With status in Norway: A review. Waste Management. 115:95–112. https://doi.org/10.1016/J.WASMAN.2020.07.025

Almeida Da Silva G, Letícia Bernardi T, Dayane P, Schaker C, Menegotto M, Valente P. 2012. Rapid Yeast DNA Extraction By Boiling And Freeze-Thawing Without Using Chemical Reagents And DNA Purification. Arch Biol Technol. 55(2):319–327.

Çankırı HC, Üniversitesi K, Çftç H, Ölçücü A. 2007. Determination of iron, copper, cadmium and zinc in some cigarette 461 brands in Turkey. Int. J. Sci. Technol. 2(1):29-32.

Charkowski AO, Barak JD, Sarreal CZ, Mandrell RE. 2002. Differences in Growth of Salmonella enterica and Escherichia coli O157:H7 on Alfalfa Sprouts. Appl Environ Microbiol. 68(6):3114. https://doi.org/10.1128/AEM.68.6.3114-3120.2002

Chen J, Xiao S, Wu X, Fang K, Liu W. 2005. Determination of lead in water samples by graphite furnace atomic absorption spectrometry after cloud point extraction. Talanta. 67(5):992–996. https://doi.org/10.1016/j.talanta.2005.04.029

Chinivasagam HN, Redding M, Runge G, Blackall PJ. 2010. Presence and incidence of food- borne pathogens in Australian chicken litter. Br Poult Sci. 51(3):311–318. https://doi.org/10.1080/00071668.2010.499424

European Council Directive (86/278/EEC) [accessed 2024 Feb 20]. https://eur- lex.europa.eu/legal-content/EN/TXT/PDF/?uri=CELEX:31986L0278

Dashti AA, Jadaon MM, Abdulsamad AM, Dashti HM. 2009. Heat Treatment of Bacteria: A Simple Method of DNA Extraction for Molecular Techniques. Kuwait Medical Journal. 41(2):117-122.

Dauda S, Ajayi F, Ndor E. 2009. Growth and Yield of Water Melon (Citrullus Lanatus) as Affected by Poultry Manure Application. EJEAFChe. 8(4):305-311.

Delaquis P, Bach S, Dinu LD. 2007. Behavior of Escherichia coli O157:H7 in leafy vegetables. J Food Prot. 70(8):1966–1974. https://doi.org/10.4315/0362-028X- 70.8.1966

Dimitrakopoulou M-E, Stavrou V, Kotsalou C, Vantarakis A. 2020. Boiling Extraction Method VS Commercial Kits for Bacterial DNA Isolation from Food Samples. J Food Sci Nutr Res. 3(4):311-319. https://doi.org/10.26502/jfsnr.2642-11000057

Dutta A. 2014. Molecular Characterization of E. coli Isolated from Raw Vegetable. Adv Anim Vet Sci. 2(1). 877-883. https://doi.org/10.14737/JOURNAL.AAVS/2014.2.1.42.45

Ekanayake EMUI, Fernando KMC. Influence of Organic Liquid Fertilizers on Growth and Yield of Abelmoschus Esculentus, Raphanus Sativus and Amaranthus Spp in Container Gardening. Sri Lankan Journal of Technology. 3(2):1-8. http://ir.lib.seu.ac.lk/handle/123456789/6404

European Parliament Regulation (EU 2019/1009). [accessed 2024 Feb 20]. https://eur- lex.europa.eu/legal- content/EN/TXT/HTML/?uri=PI_COM:Ares(2021)898281&rid=15

Fratamico PM, Gehring AG. 2014. Escherichia coli O157 and Other Shiga Toxin-Producing E. coli: Detection by Immunomagnetic Particle-Based Assays. In: Carl AB, Mary LT, editors. Encyclopedia of Food Microbiology. 2nd ed. United States: Academic Press; p 740–747. https://doi.org/10.1016/B978-0-12-384730-0.00104-X

Gagliardi J V., Karns JS. 2000. Leaching of Escherichia coli O157:H7 in diverse soils under various agricultural management practices. Appl Environ Microbiol. 66(3):877–883. https://doi.org/10.1128/AEM.66.3.877-883.

Gong Q, Chen P, Shi R, Gao Y, Zheng SA, Xu Y, Shao C, Zheng X. 2019. Health Assessment of Trace Metal Concentrations in Organic Fertilizer in Northern China. Int J Environ Res Public Health.16(6):1031. https://doi.org/10.3390/IJERPH16061031

Hai DM, Qiu X, Xu H, Honda M, Yabe M, Kadokami K, Shimasaki Y, Oshima Y. 2017. Contaminants in Liquid Organic Fertilizers Used for Agriculture in Japan. Bull Environ Contam Toxicol. 99(1):131–137. https://doi.org/10.1007/S00128-017-2081- Y/METRICS

Pollak M, Parco AD, Sul S, Favoino E. 2004. Heavy Metals And Organic Compounds From Wastes Used as Organic Fertilizers 511 - Final Report (ENV.A.2./ETU/2001/0024) [accessed 2024 Feb 21] Available online: https://ec.europa.eu/environment/pdf/waste/com512 post/hm_finalreport.pdf

Herath HMIK. 2014. Potential of Potassium Supply in Locally Available Soil Amendments for Use in Coconut Plantations. Journal of Food and Agriculture. 7(1–2):18. https://doi.org/10.4038/JFA.V7I1-2.5190

Hirneisen KA, Sharma M, Kniel KE. 2012. Human enteric pathogen internalization by root uptake into food crops. Foodborne Pathog Dis. 9(5):396–405. https://doi.org/10.1089/FPD.2011.1044

Holmes DS, Quigley M. 1981. A rapid boiling method for the preparation of bacterial plasmids. Anal Biochem. 114(1):193–197. https://doi.org/10.1016/0003- 2697(81)90473-5

Hosseini Koupaie E, Eskicioglu C. 2015. Health risk assessment of heavy metals through the consumption of food crops fertilized by biosolids: A probabilistic-based analysis. J Hazard Mater. 300:855–865. https://doi.org/10.1016/j.jhazmat.2015.08.018

Jayasumana C, Fonseka S, Fernando A, Jayalath K, Amarasinghe M, Siribaddana S, Gunatilake S, Paranagama P. 2015. Phosphate fertilizer is a main source of arsenic in areas affected with chronic kidney disease of unknown etiology in Sri Lanka. Springerplus. 4(1):1–8. https://doi.org/10.1186/S40064-015-0868-Z/TABLES/3

Kareem E, Al-Da MA, Eman Kareem AT, AL-Da MA, Hassan MJ, Husen SM. 2008. Study Mechanisms and Kinetics of removal Cadmium Ions from Aqueous soultions on Bentonite surface‬. Journal of Kerbala University. 3(1):775-805. https://doi.org/10.13140/RG.2.2.25343.92323

Khomami AM. 2015. The Possibility Using the Composted Peanut Shells in the Growth of Marigold and Viola tricolor Plants. Journal of Ornamental plants.

Lee JL, Levin RE. 2006. Selection of universal primers for PCR quantification of total bacteria associated with fish fillets. Food Biotechnol. 20(3):275–285. https://doi.org/10.1080/08905430600904492

Leyla G, Kadri G, Ümran O. 2003. Comparison of polymerase chain reaction and bacteriological culture for the diagnosis of sheep brucellosis using aborted fetus samples. Vet Microbiol. 93(1):53–61. https://doi.org/10.1016/S0378-1135(02)00442- X

Maichin B, Zischka M, Knapp G. 2003. Pressurized wet digestion in open vessels. Anal Bioanal Chem. 376(5):715–720. https://doi.org/10.1007/S00216-003-1962- 6/METRICS

Matar GM, Sidani N, Fayad M, Hadi U. 1998. Two-Step PCR-Based Assay for Identification of Bacterial Etiology of Otitis Media with Effusion in Infected Lebanese Children. J Clin Microbiol. 36(5):1185. https://doi.org/10.1128/JCM.36.5.1185-1188.1998

Mcorist AL, Jackson M, Bird AR. A comparison of five methods for extraction of bacterial DNA from human fecal samples. J Microbiol Method. 50(2):131-139. https://doi.org/10.1016/s0167-7012(02)00018-0

Mead PS, Griffin PM. 1998. Escherichia coli O157:H7. Lancet. 352(9135):1207–1212. https://doi.org/10.1016/S0140-6736(98)01267-7

Micó C, Peris M, Sánchez J, Recatalá L. 2008. Trace Element Analysis via Open‐Vessel or Microwave‐Assisted Digestion in Calcareous Mediterranean Soils. Commun Soil Sci Plant Anal. 39(5–6):890–904. https://doi.org/10.1080/00103620701881246

Miller C, Heringa S, Kim J, Jiang X. 2013. Analyzing indicator microorganisms, antibiotic resistant escherichia coli, and regrowth potential of foodborne pathogens in various organic fertilizers. Foodborne Pathog Dis. 10(6):520–527. https://doi.org/10.1089/fpd.2012.1403

Mohammed E, Mohammed T, Mohammed A. 2017. Optimization of an acid digestion procedure for the determination of Hg, As, Sb, Pb and Cd in fish muscle tissue. MethodsX. 4:513-523. https://doi.org/10.1016/J.MEX.2017.11.006

Momen AA, Zachariadis GA, Anthemidis AN, Stratis JA. 2006. Investigation of four digestion procedures for multi-element determination of toxic and nutrient elements in legumes by inductively coupled plasma-optical emission spectrometry. Anal Chim Acta. 565(1):81–88. https://doi.org/10.1016/J.ACA.2006.01.104

Muktamar Z, Sudjatmiko S, Fahrurrozi F, Setowati N, Chozin M. 2017. Soil Chemical Improvement under Application of Liquid Organic Fertilizer in Closed Agriculture System. International Journal of Agricultural Technology. 13(7.2):1715–1727.

Punde B, Ganorkar RA. 2021. Vermicomposting: Recycling Wastes into Valuable Organic Fertilizer. Journal of Engineering Research and Applications. 2(3):2342-2347.

Nicholson FA, Chambers BJ, Williams JR, Unwin RJ. 1999. Heavy metal contents of livestock feeds and animal manures in England and Wales. Bioresource Technology. 70(1):23-31. https://doi.org/10.1016/S0960-8524(99)00017-6

Ojovan MI, Lee WE. 2005. Heavy Metals. In: Ojovan MI, Lee WE, editors. An Introduction to Nuclear Waste Immobilisation. 1st ed. Netherlands: Elsevier; p 35–41. https://doi.org/10.1016/B978-008044462-8/50006-5

Phibunwatthanawong T, Riddech N. 2019. Liquid organic fertilizer production for growing vegetables under hydroponic condition. International Journal of Recycling of Organic Waste in Agriculture. 8(4):369–380. https://doi.org/10.1007/S40093-019-0257- 7/TABLES/8

Pitcher DG, Saunders NA, Owen RJ. 1989. Rapid extraction of bacterial genomic DNA with guanidium thiocyanate. Lett Appl Microbiol. 8(4):151–156. https://doi.org/10.1111/J.1472-765X.1989.TB00262.X

Ranasinghe RHAA, Ratnayake RMCS, Kannangara BTSDP. 2021. Effects of foliar and soil- applied liquid organic fertilizers on the growth of basella alba l. And centella asiatica l. Journal of Agricultural Sciences - Sri Lanka. 16(3):393–409. https://doi.org/10.4038/JAS.V16I03.9466/PRINT/

Ranaweera SRM, Nanayakkara CM, Tennakoon NA. 2010. Comparison of the Effects of Organic Fertilizers with Inorganic fertilizers on the Growth of eight months old Coconut Seedlings and the Nutrient Availability and Soil Microbial Activity. In: Proceedings of the 15th International Forestry and Environment Symposium; 09 February 2012; University of Sri Jayewardenepura: Sri Lanka. p. 93-100. https://doi.org/10.31357/fesympo.v15i0.167

Roose-Amsaleg CL, Garnier-Sillam E, Harry M. 2001. Extraction and purification of microbial DNA from soil and sediment samples. Applied Soil Ecology. 18(1):47–60. https://doi.org/10.1016/S0929-1393(01)00149-4

Sager M. 2007. Trace and nutrient elements in manure, dung, and compost samples in Austria. Soil Biol Biochem. 39(6):1383–1390. https://doi.org/10.1016/j.soilbio.2006.12.015

Salama AK, Radwan MA. 2005. Heavy Metals (Cd, Pb) and Trace Elements (Cu, Zn) Contents in Some Food Stuffs from the 500 Egyptian Market. Emir J Food Agric. 17(1):34–42. https://doi.org/10.9755/EJFA.V12I1.5046

Shaji H, Chandran V, Mathew L. 2021. Organic fertilizers as a route to controlled release of nutrients. In: Lewu FB, Volova T, Thomas S, Rakhimol KR, editors. Controlled Release Fertilizers for Sustainable Agriculture. 1st ed. Netherlands: Elsevier; p. 231–245. https://doi.org/10.1016/b978-0-12-819555-0.00013-3

Spångberg J, Hansson PA, Tidåker P, Jönsson H. 2011. Environmental impact of meat meal fertilizer vs. chemical fertilizer. Resour Conserv Recycl. 55(11):1078–1086. https://doi.org/10.1016/j.resconrec.2011.06.002

Spano G, Beneduce L, Terzi V, Stanca AM, Massa S. 2005. Real‐time PCR for the detection of Escherichia coli O157:H7 in dairy and cattle wastewater. Lett Appl Microbiol. 40(3):164–171. https://doi.org/10.1111/J.1472-765X.2004.01634.X

Spano JP, Lagorce C, Atlan D, Milano G, Domont J, Benamouzig R, Attar A, Benichou J, Martin A, Morere JF, et al. 2005. Impact of EGFR expression on colorectal cancer patient prognosis and survival. Annals of Oncology. 16(1):102–108. https://doi.org/10.1093/annonc/mdi006

Sri Lanka Standard 1702:2021 UDC 628. [accessed 2024 Mar 12]. https://www.agrimin.gov.lk/web/images/pdf/Procurement/2021.07.01/sls%201702_20 21.pdf

Tchounwou PB, Yedjou CG, Patlolla AK, Sutton DJ. 2012. Heavy metal toxicity and the environment. EXS. 101:133–164. https://doi.org/10.1007%2F978-3-7643-8340-4_6

Tenaillon O, Skurnik D, Picard B, Denamur E. 2010. The population genetics of commensal Escherichia coli. Nature Reviews Microbiology. 8(3):207–217. https://doi.org/10.1038/nrmicro2298

Tsaniya AR, Dewi EN, Anggo AD. 1943. Characteristics of liquid organic fertilizer from different composition types of seaweed between Gracilaria sp. and Sargassum sp. In: J Phys Conf Ser, 10th International Seminar on New Paradigm and Innovation of Natural Sciences and its Application (ISNPINSA); 24-25 September 2020; Indonesia. p. 012071. https://doi.org/10.1088/1742-6596/1943/1/012071

Tüzen M. 2003. Determination of heavy metals in soil, mushroom and plant samples by atomic absorption spectrometry. Microchemical Journal. 74(3):289–297. https://doi.org/10.1016/S0026-265X(03)00035-3

Uddin AH, Khalid RS, Alaama M, Abdualkader AM, Kasmuri A, Abbas SA. 2016. Comparative study of three digestion methods for elemental analysis in traditional medicine products using atomic absorption spectrometry. J Anal Sci Technol. 7(1):1– 7. https://doi.org/10.1186/s40543-016-0085-6

Wahyudi F, Priatmadi BJ, Purnomo J. 2021. The Effect of Organic Fertilizer and Liquid Complementary Fertilizer on The Seed Growing Medium from Topsoil. Tropical Wetland Journal. 7(1):31–38. https://doi.org/10.20527/TWJ.V7I1.93

Warriner K, Spaniolas S, Dickinson M, Wright C, Waites WM. 2003. Internalization of bioluminescent Escherichia coli and Salmonella Montevideo in growing bean sprouts. J Appl Microbiol. 95(4):719–727. https://doi.org/10.1046/J.1365-2672.2003.02037.X

Wathudura PD, Peiris C, Navarathna CM, Mlsna TE, Kaumal MN, Vithanage M, Gunatilake SR. 2020. Microwave and open vessel digestion methods for biochar. Chemosphere. 239:124788. https://doi.org/10.1016/J.CHEMOSPHERE.2019.124788

Whalen JK, Chang C, Clayton GW, Carefoot JP. 2000. Cattle Manure Amendments Can Increase the pH of Acid Soils. Soil Science Society of America Journal. 64(3):962– 966. https://doi.org/10.2136/SSSAJ2000.643962X

Wilkinson KG, Tee E, Tomkins RB, Hepworth G, Premier R. 2011. Effect of heating and aging of poultry litter on the persistence of enteric bacteria. Poult Sci. 90(1):10–18. https://doi.org/10.3382/PS.2010-01023

World Health Organization International Agency for Research on Cancer (IARC). 2020. World Cancer Report: Cancer Research for Cancer Prevention. Wild CP WESB, IARC.

Wright MH, Adelskov J, Greene AC. 2017. Bacterial DNA Extraction Using Individual Enzymes and Phenol/Chloroform Separation. J Microbiol Biol Educ. 18(2):48. https://doi.org/10.1128/JMBE.V18I2.1348

Yadav M, Gupta R, Sharma RK. 2019. Green and Sustainable Pathways for Wastewater Purification. In: Ahuja S, editor. Advances in Water Purification Techniques: Meeting the Needs of Developed and Developing Countries. 1st ed. Netherlands: Elsevier; p 355–383. https://doi.org/10.1016/B978-0-12-814790-0.00014-4

Yamagishi J, Sato Y, Shinozaki N, Ye B, Tsuboi A, Nagasaki M, Yamashita R. 2016. Comparison of Boiling and Robotics Automation Method in DNA Extraction for

Metagenomic Sequencing of Human Oral Microbes. PLoS One.11(4):e0154389. https://doi.org/10.1371/JOURNAL.PONE.0154389

Ye J, Coulouris G, Zaretskaya I, Cutcutache I, Rozen S, Madden TL. 2012. Primer-BLAST: a tool to design target-specific primers for polymerase chain reaction. BMC Bioinformatics. 13:134. https://doi.org/10.1186/1471-2105-13-134

Zhong WS, Ren T, Zhao LJ. 2016. Determination of Pb (Lead), Cd (Cadmium), Cr (Chromium), Cu (Copper), and Ni (Nickel) in Chinese tea with high-resolution continuum source graphite furnace atomic absorption spectrometry. J Food Drug Anal. 24(1):46–55. https://doi.org/10.1016/j.jfda.2015.04.010

Zohaib Anjum M, Adnan M, Asif M, Muhammad Bilal H, Ahmad T, Abd-ur-Rehman H. 2020. Organic and Inorganic Fertilizer; Integral Part for Crop Production. EC Agriculture. 6(3):1-7.

Types of Interferences in AAS Available online: http://delloyd.50megs.com/MOBILE/AAinterfer.html (accessed on 28 February 2024).

Sofikitis, A.M.; Colin, J.L.; Desboeufs, K. V.; Losno, R. Iron Analysis in Atmospheric Water Samples by Atomic Absorption Spectroscopy (AAS) in Water-Methanol. Anal Bioanal Chem 2004, 378, 460–464.

Hu, Z.; Hu, S.; Gao, S.; Liu, Y.; Lin, S. Volatile Organic Solvent-Induced Signal Enhancements in Inductively Coupled Plasma-Mass Spectrometry: A Case Study of Methanol and Acetone. Spectrochim Acta Part B At Spectrosc 2004, 59, 1463–1470.

Armbruster, D.A.; Pry, T. Limit of Blank, Limit of Detection and Limit of Quantitation. Clin Biochem Rev 2008, 29, 49-52.

Allegrini, F.; Olivieri, A.C. IUPAC-Consistent Approach to the Limit of Detection in Partial Least-Squares Calibration. Anal Chem 2014, 86, 7858–7866.

Mocaka-’, J.; Bonda, A.M.; Mitchella, S.; Scollaryb, G. A Statictical Overview of Standard (IUPAC & ACS) New Procedures for Determining the Limits of Detection and Quantification Pure & Appl. Chern 1997, 69, 297–328.

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2024-05-06

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Yasara, D. L. I., Dananjana, W. I., & Wijeratne, B. (2024). Analysis of the heavy metals and Escherichia coli contamination of liquid organic fertilizers in the local market, Sri Lanka. Brazilian Journal of Development, 10(5), e69470. https://doi.org/10.34117/bjdv10n5-017

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